论文标题

ZONA燃烧的人胚泡的图像分割

Image Segmentation of Zona-Ablated Human Blastocysts

论文作者

Harun, Md Yousuf, Rahman, M Arifur, Mellinger, Joshua, Chang, Willy, Huang, Thomas, Walker, Brienne, Hori, Kristen, Ohta, Aaron T.

论文摘要

通过提供新的定量和客观的胚胎质量衡量标准,可以通过体外受精(IVF)自动化人类植入前胚胎分级。当前的IVF程序通常仅使用定性手动分级,这在鉴定遗传异常胚胎方面受到限制。通过更准确地鉴定遗传异常,对胚泡扩张的自动定量评估可以潜在地提高持续的妊娠率,并降低异常妊娠的健康风险。胚泡的膨胀率是确定发育胚胎的质量的重要形态学特征。在这项工作中,提出了一种基于深度学习的人类胚泡图像分割方法,目的是促进挑战性的不规则形状的胚泡。此处评估的胚泡类型已经经历了Zona pellucida的激光消融,这是在进行滋养固醇活检之前所必需的。这使扩展的胚泡大小的手动测量变得复杂,这与遗传异常相关。测试组的实验结果表明分割大大提高了扩展测量的准确性,最高准确性,98.1%的精度,98.8%的召回,98.4%的骰子系数和96.9%的jaccard Index。

Automating human preimplantation embryo grading offers the potential for higher success rates with in vitro fertilization (IVF) by providing new quantitative and objective measures of embryo quality. Current IVF procedures typically use only qualitative manual grading, which is limited in the identification of genetically abnormal embryos. The automatic quantitative assessment of blastocyst expansion can potentially improve sustained pregnancy rates and reduce health risks from abnormal pregnancies through a more accurate identification of genetic abnormality. The expansion rate of a blastocyst is an important morphological feature to determine the quality of a developing embryo. In this work, a deep learning based human blastocyst image segmentation method is presented, with the goal of facilitating the challenging task of segmenting irregularly shaped blastocysts. The type of blastocysts evaluated here has undergone laser ablation of the zona pellucida, which is required prior to trophectoderm biopsy. This complicates the manual measurements of the expanded blastocyst's size, which shows a correlation with genetic abnormalities. The experimental results on the test set demonstrate segmentation greatly improves the accuracy of expansion measurements, resulting in up to 99.4% accuracy, 98.1% precision, 98.8% recall, a 98.4% Dice Coefficient, and a 96.9% Jaccard Index.

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