论文标题

我们可以从旅行者的数据中学到什么来检测疾病暴发的疾病暴发 - 案例研究19 Covid-19

What Can We Learn from the Travelers Data in Detecting Disease Outbreaks -- A Case Study of the COVID-19 Epidemic

论文作者

Bao, Le, Zhang, Ying, Niu, Xiaoyue

论文摘要

背景:旅行是疾病出现的有效力量。我们讨论了旅行者案件报告如何有助于及时发现疾病爆发。方法:使用旅行者数据,我们估计流行病的一些指标,这些指标影响了决策制定和政策,包括指数增长率,加倍时间以及严重病例超过医院能力的概率,在多个国家的COVID-19的初始阶段。当他们失踪时,我们将到达日期推定了。我们将旅行者数据的估计值与来自国内数据的估计值进行了比较。我们定量评估了每个案例报告的影响,并知道到达日期对估计的影响。调查结果:我们估计了旅行原点的每日指数增长率,并检查了增长率始终高于0.1的日期(相当于时间<7天)。我们发现,这些日期非常接近于做出关键决定的日期,例如城市锁定和国家紧急公告。仅使用旅行者数据,如果假定的流行病开始日期相对准确,并且旅行者样本代表了一般人群,则从旅行者数据中估计的增长率与国内数据一致。我们还讨论了旅行者数据可能导致估计的情况。从数据影响研究中,我们发现,最近的旅行案例对每天的估计产生了更大的影响,并且随着更多案件的可用,每个案例报告的影响越小。我们提供了确定局部流行病增长率是否高于一定水平的最小出口案例数量,并开发了一个用户友好的闪亮应用程序来适应各种情况。

Background: Travel is a potent force in the emergence of disease. We discussed how the traveler case reports could aid in a timely detection of a disease outbreak. Methods: Using the traveler data, we estimated a few indicators of the epidemic that affected decision making and policy, including the exponential growth rate, the doubling time, and the probability of severe cases exceeding the hospital capacity, in the initial phase of the COVID-19 epidemic in multiple countries. We imputed the arrival dates when they were missing. We compared the estimates from the traveler data to the ones from domestic data. We quantitatively evaluated the influence of each case report and knowing the arrival date on the estimation. Findings: We estimated the travel origin's daily exponential growth rate and examined the date from which the growth rate was consistently above 0.1 (equivalent to doubling time < 7 days). We found those dates were very close to the dates that critical decisions were made such as city lock-downs and national emergency announcement. Using only the traveler data, if the assumed epidemic start date was relatively accurate and the traveler sample was representative of the general population, the growth rate estimated from the traveler data was consistent with the domestic data. We also discussed situations that the traveler data could lead to biased estimates. From the data influence study, we found more recent travel cases had a larger influence on each day's estimate, and the influence of each case report got smaller as more cases became available. We provided the minimum number of exported cases needed to determine whether the local epidemic growth rate was above a certain level, and developed a user-friendly Shiny App to accommodate various scenarios.

扫码加入交流群

加入微信交流群

微信交流群二维码

扫码加入学术交流群,获取更多资源