论文标题
对抗性多尺度学习用于重叠染色体细分的学习
Adversarial Multiscale Feature Learning for Overlapping Chromosome Segmentation
论文作者
论文摘要
染色体核型分析在疾病的诊断和治疗中至关重要,尤其是对于遗传疾病。由于手动分析是高度的时间和精力,因此基于图像的计算机辅助自动染色体核型分析通常用于提高分析的效率和准确性。由于染色体的带状形状,成像时它们很容易彼此重叠,因此后来显着影响分析的准确性。常规的重叠染色体分割方法通常基于手动标记的特征,因此,其性能很容易受到图像的质量(例如分辨率和亮度)的影响。为了解决这个问题,在本文中,我们提出了一个对抗性的多尺度学习框架,以提高重叠染色体分割的准确性和适应性。具体来说,我们首先采用具有密集的跳过连接的嵌套U形网络作为生成器,以通过利用多尺度功能来探索染色体图像的最佳表示。然后,我们使用条件生成的对抗网络(CGAN)生成类似于原始图像的图像,通过应用最小二乘目标的训练稳定性可以增强其图像。最后,我们采用Lovasz-SoftMax来帮助模型在连续的优化设置中收敛。与已建立的算法相比,通过在八个评估标准中使用公共数据集证明了我们框架的性能优越,这表明其在重叠染色体细分中的巨大潜力
Chromosome karyotype analysis is of great clinical importance in the diagnosis and treatment of diseases, especially for genetic diseases. Since manual analysis is highly time and effort consuming, computer-assisted automatic chromosome karyotype analysis based on images is routinely used to improve the efficiency and accuracy of the analysis. Due to the strip shape of the chromosomes, they easily get overlapped with each other when imaged, significantly affecting the accuracy of the analysis afterward. Conventional overlapping chromosome segmentation methods are usually based on manually tagged features, hence, the performance of which is easily affected by the quality, such as resolution and brightness, of the images. To address the problem, in this paper, we present an adversarial multiscale feature learning framework to improve the accuracy and adaptability of overlapping chromosome segmentation. Specifically, we first adopt the nested U-shape network with dense skip connections as the generator to explore the optimal representation of the chromosome images by exploiting multiscale features. Then we use the conditional generative adversarial network (cGAN) to generate images similar to the original ones, the training stability of which is enhanced by applying the least-square GAN objective. Finally, we employ Lovasz-Softmax to help the model converge in a continuous optimization setting. Comparing with the established algorithms, the performance of our framework is proven superior by using public datasets in eight evaluation criteria, showing its great potential in overlapping chromosome segmentation