论文标题
非近代多种自我组织
Non-reciprocal multifarious self-organization
论文作者
论文摘要
生活系统的标志是能够采用一组通用的多功能构建块,这些构建块可以以最低的成本来控制多种不同的结构。这种能力只能在非平衡条件下提供,这可以从这种动态过程的耗尽性质中可以明显看出。在过去的三十年中,合成自组装的发展具有显着的增强,从而开发了在不同尺度上设计特定相互作用的工具,从核酸和肽到蛋白质和胶体。为了实现对这种自组装结构及其之间过渡的自动动力控制,我们需要确定可以实现此类过程的非平衡动力学的相关基本方面。在这里,我们将可编程的非转录相互作用确定为可以实现此类功能的潜在范式。特别是,我们提出了一个模型,该模型使系统能够学习和检索预定的所需结构和它们之间的过渡,从而表现为形状。学习规则由导致结构平衡组装的相互作用组成,而非交流相互作用会导致结构之间的非平衡动力学跃迁。
A hallmark of living systems is the ability to employ a common set of versatile building blocks that can self-organize into a multitude of different structures, in a way that can be controlled with minimal cost. This capability can only be afforded in non-equilibrium conditions, as evident from the energy-consuming nature of the plethora of such dynamical processes. In the last three decades, synthetic self-assembly has experienced a significant boost with the development of tools to design specific interactions at different scales, from nucleic acids and peptides to proteins and colloids. To achieve automated dynamical control of such self-assembled structures and transitions between them, we need to identify the relevant fundamental aspects of non-equilibrium dynamics that can enable such processes. Here, we identify programmable non-reciprocal interactions as a potential paradigm using which such functionalities can be achieved. In particular, we propose a model that enables a system to learn and retrieve predetermined desired structures and transition between them, thus behaving as a shape-shifter. The learning rule is composed of reciprocal interactions that lead to the equilibrium assembly of the structures, and non-reciprocal interactions that give rise to non-equilibrium dynamical transitions between the structures.